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Publication of Dr. Pankaj Barah

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Publication

  1. Pallabi Patowary, Dhruba K Bhattacharyya, Pankaj Barah, SNMRS: An advanced measure for Co-expression network analysis, Computers in Biology and Medicine, 143, 2022, 4.589, Click Here (DOI)
  2. Uttariya Pal, Ankur Sahu, Pankaj Barah, Anil Mukund Limaye, Transcriptomic data of MCF-7 breast cancer cells treated with G1, a G-protein coupled estrogen receptor (GPER) agonist, Data in Brief, 41 (107948), 2022, 1.13, Click Here (DOI)
  3. Akash Das, Mazahar Moin, Ankur Sahu, Mrinmoy Kshattry, PB Kirti, Pankaj Barah, Time-Course Transcriptome Analysis Identifies Rewiring patterns of Transcriptional Regulatory Networks in Rice under Rhizoctonia solani infection., Gene, 828 (146468), 2022, 3.688, Click Here (DOI)
  4. Drishtee Barua, Asutosh Mishra, P.B. Kirti and Pankaj Barah, Identifying Signal-Crosstalk Mechanism in Maize Plants during Combined Salinity and Boron Stress using Integrative Systems Biology Approaches., BioMed Research International, 2022 (1027288), 2022, 3.411, Click Here (DOI)
  5. Nabanita Roy, Barasha Rani Dihingia, Pankaj Barah, Integrative network-based approaches identified systems-level molecular signatures associated with gallbladder cancer pathogenesis from gallstone diseases, Journal of Biosciences, 47:2 (1-17), 2022, 2.107, Click Here (DOI)
  6. Cinmoyee Baruah, Prangan Nath, Pankaj Barah, LncRNAs in neuropsychiatric disorders and computational insights for their prediction, Molecular Biology Reports, 49-12 (11515-11534), 2022, 2.7, Click Here (DOI)
  7. Akash Das, Asutosh Mishra, Anurag Kashyap, Mahantesha BN Naika, Pankaj Barah, “KRiShI”: a manually curated knowledgebase on rice sheath blight disease, Functional & Integrative Genomics, 22:6 (1403-1410), 2022, 3.3, Click Here (DOI)
  8. Hussain Ahmed Chowdhury, Pankaj Barah, Dhruba Kumar Bhattacharyya, Jugal Kumar Kalita, Identification of potential Parkinson’s disease biomarkers using computational biology approaches, Network Modeling Analysis in Health Informatics and Bioinformatics, 10(1), 1-16, 2021, 1.20, Click Here (DOI)
  9. Nabanita Roy, Mrinmoy Kshattry, Susmita Mandal, Mohit Kumar, Dhruba Kumar Bhattacharyya and Pankaj Barah , An Integrative Systems Biology Approach Identifies Molecular Signatures Associated with Gallbladder Cancer Pathogenesis, Journal of Clinical Medicine, 10(16), 3520, 2021, 2.046, Click Here (DOI)
  10. Nabanita Roy, Mithil Gaikwad, Dhruba Kr Bhattacharrya, Pankaj Barah, Identification of Systems Level Molecular Signatures from Glioblastoma Multiforme Derived Extracellular Vesicles, Journal of Molecular Neuroscience, 71(6), 1156-1167, 2021, 3.444, Click Here (DOI)
  11. Ankur Sahu, Hussain Ahmed Chowdhury, Mithil Gaikwad, Chen Chongtham, Uddip Talukdar, Jadab Kishor Phukan, Dhruba Kumar Bhattacharyya, Pankaj Barah, Integrative network analysis identifies differential regulation of neuroimmune system in Schizophrenia and Bipolar disorde, Brain, Behavior, & Immunity-Health, 2, 100023, 2020, 1.133, Click Here (DOI)
  12. Pallabi Patowary, Dhruba K Bhattacharyya, Pankaj Barah, Identifying critical genes in esophageal squamous cell carcinoma using an ensemble approach, Informatics in Medicine Unlocked, 18, 100277, 2020, 3.37, Click Here (DOI)
  13. Ankur Sahu, Akash Das, Katherine Saikia, Pankaj Barah, Temperature differentially modulates the transcriptome response in Oryza sativa to Xanthomonas oryzae pv. oryzae infection, Genomics, 112(6), 4842-4852, 2020, 6.205, Click Here (DOI)
  14. Tulika Kakati, Dhruba K Bhattacharyya, Pankaj Barah, Jugal K Kalita, Comparison of methods for differential co-expression analysis for disease biomarker prediction, Computers in biology and medicine, 113, 103380, 2019, 4.434, Click Here (DOI)
  15. Archana Singh, Anuj Kumar Borah, Kamalakshi Deka, Akash Protim Gogoi, Kamalesh Verma, Pankaj Barah, Sougata Saha, Arginylation regulates adipogenesis by regulating expression of PPARγ at transcript and protein level, Biochimica et Biophysica Acta (BBA)-Molecular and Cell Biology of Lipids, 1864(4), 596-607, 2019, 4.698, Click Here (DOI)
  16. Körber, V., Yang, J., Barah, P., Wu, Y., Stichel, D., Gu, Z., ... & Lichter, P, Evolutionary trajectories of IDHWT glioblastomas reveal a common path of early tumorigenesis instigated years ahead of initial diagnosis, Cancer Cell, 35(4), 692-704, 2019, 31.74, Click Here (DOI)
  17. Pallabi Patowary, Dhruba K Bhattacharyya, Pankaj Bara, Biomarker identification for escc using integrative DEA, Lecture Notes in Computer Science book series, 11942, 2019, , Click Here (DOI)
  18. Anusree Mahanta, Piyali Ganguli, Pankaj Barah, Ram Rup Sarkar, Neelanjana Sarmah, Saurav Phukan, Mayuri Bora, Shashi Baruah, Integrative approaches to understand the mastery in manipulation of host cytokine networks by protozoan parasites with emphasis on Plasmodium and Leishmania species, Frontiers in immunology, 9, 296, 2018, 5.085, Click Here (DOI)
  19. Pankaj Barah, Naresh Doni Jayavelu, Ramanathan Sowdhamini, Khader Shameer, Atle M Bones, Transcriptional regulatory networks in Arabidopsis thaliana during single and combined stresses, Nucleic acids research, 44(7), 3147-3164, 2016, 16.97, Click Here (DOI)
  20. Pankaj Barah, Atle M Bones, Multidimensional approaches for studying plant defence against insects: from ecology to omics and synthetic biology, Journal of experimental botany, 66(2), 479-473, 2015, 5.908, Click Here (DOI)
  21. Pankaj Barah, Kaveri Bhuyan, Endangered species damned by dams, Nature, 515 (1725), 37, 2014, 42.78, Click Here (DOI)
  22. Pankaj Barah, Per Winge, Anna Kusnierczyk, Diem Hong Tran, Atle M Bones, Molecular signatures in Arabidopsis thaliana in response to insect attack and bacterial infection, PLoS One, 8(3), 2013, 3.24, Click Here (DOI)
  23. Simon Rasmussen, Pankaj Barah, Maria Cristina Suarez-Rodriguez, Simon Bressendorff, Pia Friis, Paolo Costantino, Atle M Bones, Henrik Bjørn Nielsen, John Mundy, Transcriptome responses to combinations of stresses in Arabidopsis, Plant physiology, 161(4), 1783-1794, 2013, 3.121, Click Here (DOI)
  24. Pankaj Barah, Naresh Doni Jayavelu, Simon Rasmussen, Henrik Bjørn Nielsen, John Mundy, Atle M Bones, Genome-scale cold stress response regulatory networks in ten Arabidopsis thaliana ecotypes, BMC genomics, 14(1), 1-16, 2013, 4.43, Click Here (DOI)
  25. Pankaj Barah, Naresh Doni Jayavelu, John Mundy, Atle M Bones, Genome scale transcriptional response diversity among ten ecotypes of Arabidopsis thaliana during heat stress, Frontiers in plant science, 4, 532, 2013, 4.407, Click Here (DOI)
  26. Sankaran Sandhya, Saane Sudha Rani, Barah Pankaj, Madabosse Kande Govind, Bernard Offmann, Narayanaswamy Srinivasan, Ramanathan Sowdhamini, Length variations amongst protein domain superfamilies and consequences on structure and function, PLoS One, 4(3), 2009, 3.24, Click Here (DOI)
  27. Pankaj Barah, Somdatta Sinha, Analysis of protein folds using protein contact networks, Pramana, 71, 369-378, 2008, 1.688, Click Here (DOI)
  28. Sankaran Sandhya, Saane Sudha Rani, Barah Pankaj, Madabosse Kande Govind, Bernard Offmann, Narayanaswamy Srinivasan, Ramanathan Sowdhamini, CUSP: an algorithm to distinguish structurally conserved and unconserved regions in protein domain alignments and its application in the study of large length variations, BMC Structural Biology, 1, 1-14, 2008, 2.222, Click Here (DOI)