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Publication of Dr. Anupam Nath Jha

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Publication

  1. Sana Quraishi, Debanjan Saha, Kalpana Kumari, Anupam Nath Jha and Atanu Singha Roy, Non-covalent binding interaction of bioactive coumarin esculetin with calf thymus DNA and yeast transfer RNA: A detailed investigation to decipher the binding affinities, binding location, interacting forces and structural alterations at a molecular , International Journal of Biological Macromolecules, 257: 128568, 2024, 8.025, Click Here (DOI)
  2. Zaved Hazarika and Anupam Nath Jha, Structural and functional premise of transport protein transthyretin in the sight of silver and zinc oxide nanoparticles through atomistic simulations, Inorganica Chimica Acta , 563: 121923, 2024, 3.118, Click Here (DOI)
  3. Saynaz A Choudhary, Debarun Patra, Archana Sinha, Sayani Mazumder, Rajat Pant, Raju Chouhan, Anupam Nath Jha, Biswamohan Prusty, Debasis Manna, Sajal K Das, Kulbhushan Tikoo, Durba Pal and Suman Dasgupta, A small molecule potent IRAK4 inhibitor abrogates lipopolysaccharide-induced macrophage inflammation in-vitro and in-vivo, European Journal of Pharmacology, 436: 114425, 2023, 4.96, Click Here (DOI)
  4. Debanjan Saha and Anupam Nath Jha, Computational multi‐target approach to target essential enzymes of Leishmania donovani using comparative molecular dynamic simulations and MMPBSA analysis, Phytochemical Analysis, 23: 548 - 562, 2023, 3.024, Click Here (DOI)
  5. Indu Kumari, Dinesh Lakhanpal, Sandeep Swargam and Anupam Nath Jha, Leishmaniasis: Omics approaches to understand its biology from molecule to cell level, Current Protein & Peptide Science, 23: 548 - 562, 2023, 3.118, Click Here (DOI)
  6. Anupam Nath Jha, Editorial: Computational approaches to build therapeutic paradigms targeting genes, proteins and pathways against neglected tropical diseases (NTDs) , Frontiers in Genetics , 14: 1183034, 2023, 3.7, Click Here (DOI)
  7. Sona Lyndem, Upasana Hazarika, Anindita Bhatta, Vivek Prakash, Anupam Nath Jha and Atanu Singha Roy, In-vitro Interactions of Esculin and Esculetin with Bovine Hemoglobin Alter its Structure and Inhibit Aggregation: Insights from Spectroscopic and Computational Studies, New Journal of Chemistry , 47: 14447, 2023, 3.925, Click Here (DOI)
  8. Priya Kumari, Afrin Mamud and Anupam Nath Jha, Review on the Drug Intolerance and Vaccine Development for the Leishmaniasis, Current Drug Targets , 24: 1023-1031, 2023, 3.2, Click Here (DOI)
  9. Debanjan Saha, Nayan Jyoti Borah and Anupam Nath Jha, Molecular scaffold recognition of drug molecules against essential genes of Leishmania donovani using biocomputing approach, South African Journal of Botany, 162: 52-63, 2023, 3.111, Click Here (DOI)
  10. Kakali Baruah, Ajit Kumar Singh, Kalpana Kumari, Dasuk Lyngdoh Nongbri, Anupam Nath Jha and Atanu Singha Roy, Interactions of Turmeric- and Curcumin-Functionalized Gold Nanoparticles with Human Serum Albumin: Exploration of Protein Corona Formation, Binding, Thermodynamics, and Antifibrillation Studies, Langmuir, 40: 1381–1398, 2023, 40: 1381–1398, Click Here (DOI)
  11. Ankita Khataniar, Upasana Pathak, Sanchaita Rajkhowa and Anupam Nath Jha, A Comprehensive Review of Drug Repurposing Strategies against Known Drug Targets of COVID-19, COVID , 2 (2): 148-167, 2022, 2 (2): 148-167, Click Here (DOI)
  12. Zaved Hazarika, Surovi Saikia and Anupam Nath Jha, Interaction of Nanomaterials with Protein-Peptide, Current Protein & Peptide Science, 23: 548 - 562, 2022, 3.118, Click Here (DOI)
  13. Muzamil Ahmad Rather, Debanjan Saha, Shuvam Bhuyan, Anupam Nath Jha and Manabendra Mandal, Quorum Quenching: A Drug Discovery Approach Against Pseudomonas aeruginosa, Microbiological Research, 264: 127173, 2022, 5.19, Click Here (DOI)
  14. Sharat Sarmah, Upasana Hazarika, Sony Moni Das, Sana Quraishi, Anindita Bhatta, Vinay Kumar Belwal, Anupam Nath Jha and Atanu Singha Roy, Deciphering the interactions of phytochemicals with ovalbumin, the major food allergen from egg-white: Spectroscopic and computational studies, Luminescence, 264: 127173, 2022, 2.613, Click Here (DOI)
  15. Omkar Indari, Ajit Kumar Singh, Deeksha Tiwari, Hem Chandra Jha and Anupam Nath Jha, Deciphering antiviral efficacy of malaria box compounds against malaria exacerbating viral pathogens-Epstein Barr Virus and SARS-CoV-2, an in silico study, Medicine in Drug Discovery, 16: 100146, 2022, 16: 100146, Click Here (DOI)
  16. Sona Lyndem, Upasana Hazarika, P Athul, Anindita Bhatta, Vivek Prakash, Anupam Nath Jha and Atanu Singha Roy, A comprehensive in vitro exploration into the interaction mechanism of coumarin derivatives with bovine hemoglobin: Spectroscopic and computational methods, Journal of Photochemistry and Photobiology A: Chemistry, 436: 114425 , 2022, 5.141 , Click Here (DOI)
  17. Vandana Vinayak, Mohd Jahir Khan, Anupam Nath Jha and Harish, Photosystem I P700 Chlorophyll a Apoprotein A1 as PCR Marker to Identify Diatoms and their Associated Lineage, Journal of Eukaryotic Microbiology, 68 (6): e12866 , 2021, 68 (6): e12866 , Click Here (DOI)
  18. Shweta Jakhmola, Zaved Hazarika Anupam Nath Jha and Hem Chandra Jha, In silico analysis of antiviral phytochemicals efficacy against Epstein–Barr virus glycoprotein H, Journal of Biomolecular Structure and Dynamics, , 2021, , Click Here (DOI)
  19. Nikita Bora and Anupam Nath Jha*, In silico Metabolic Pathway Analysis Identifying Target Against Leishmaniasis – A Kinetic Modeling Approach, Frontiers in Genetics , 11:179, 2020, 11:179, Click Here (DOI)
  20. Sourav Das, Zaved Hazarika, Sharat Sarmah, Kakali Baruah, Mostofa Ataur Rohman, Debojit Paul, Anupam Nath Jha* and Atanu Singha Roy*, Exploring the interaction of bioactive kaempferol with serum albumin, lysozyme and hemoglobin: A biophysical investigation using multi-spectroscopic, docking and molecular dynamics simulation studies, Journal of Photochemistry and Photobiology B Biology, 205:111825, 2020, 205:111825, Click Here (DOI)
  21. Sourav Das, Sharat Sarmah, Zaved Hazarika, Mostofa Ataur Rohman, Pallavi Sarkhel, Anupam Nath Jha and Atanu Singha Roy, Targeting the heme protein hemoglobin by (−)-epigallocatechin gallate and the study of polyphenol–protein association using multi-spectroscopic and computational methods, Physical Chemistry Chemical Physics, 22:2212-2228, 2020, , Click Here (DOI)
  22. Zaved Hazarika and Anupam Nath Jha*, Computational Analysis of the Silver Nanoparticle–Human Serum Albumin Complex, ACS Omega, 5:170-178, 2020, , Click Here (DOI)
  23. Saynaz A Choudhary, Nikita Bora, Dipanjan Banerjee, Leena Arora, Anindhya Sundar Das, Rakesh Yadav, Karl-Norbert Klotz, Durba Pal, Anupam Nath Jha* and Suman Dasgupta*, A novel small molecule A2A receptor agonist, indirubin-3'-monoxime, alleviates lipid-induced inflammation and insulin resistance in 3T3-L1 adipocyte, Biochemical Journal, 476:2371-2391, 2019, 4.331, Click Here (DOI)
  24. Nikita Bora and Anupam Nath Jha*, An integrative approach using systems biology, mutational analysis with molecular dynamics simulation to challenge the functionality of a target protein, Chemical Biology & Drug Design, 93:1050-1060, 2019, 2.548, Click Here (DOI)
  25. Sapna M. Borah and Anupam Nath Jha*, Identification and analysis of structurally critical fragments in HopS2, BMC Bioinformatics, 19(Suppl 13):552, 2019, 3.242, Click Here (DOI)
  26. Parth S Nayak, Sapna M Borah, Himanshu Gogoi, Shreyasi Asthana, Rakesh Bhatnagar, Anupam Nath Jha and Suman Jha*, Lactoferrin adsorption onto silver nanoparticle interface: implications of corona on protein conformation, nanoparticle cytotoxicity and the formulation adjuvanticity, Chemical Engineering Journal, 361:470-484, 2019, 10.652, Click Here (DOI)
  27. Shreyasi Asthana, Zaved Hazarika, Parth S Nayak, Jyoti Roy, Anupam Nath Jha, Bibekanand Mallick and Suman Jha*, Insulin adsorption onto zinc oxide nanoparticle mediates conformational rearrangement into amyloid-like structure with enhanced cytotoxic propensity, BBA - General Subjects, 1863:153-166, 2019, 3.422, Click Here (DOI)
  28. Sourav Das, Nikita Bora, Mostofa Ataur Rohman, Raju Sharma, Anupam Nath Jha* and Atanu Singha Roy*, Molecular recognition of bio-active flavonoids quercetin and rutin by bovine hemoglobin: An overview of the binding mechanism, thermodynamics and structural aspects through multi-spectroscopic and molecular dynamics simulation studies, Physical Chemistry Chemical Physics, 20: 21668-21684, 2018, 3.43, Click Here (DOI)
  29. Sourav Das, Portia Khanikar, Zaved Hazarika, Mostofa Ataur Rohman, Antara Uzir, Anupam Nath Jha* and Atanu Singha Roy*, Deciphering the Interaction of 5,7‐Dihydroxyflavone with Hen-Egg-White Lysozyme through Multispectroscopic and Molecular Dynamics Simulation Approaches, Chemistry Select, 3:4911-4922, 2018, 1.811, Click Here (DOI)
  30. Sanchaita Rajkhowa, Sapna M Borah, Anupam Nath Jha* and Ramesh Ch. Deka*, Design of Plasmodium falciparum PI(4)KIIIβ Molecular Dynamics and Molecular Docking Methods, Chemistry Select, 2:1783-1892, 2017, 1.811, Click Here (DOI)
  31. M Arakha, Sapna M Borah, M Saleem, Anupam Nath Jha, Suman Jha*, Interfacial assembly at silver nanoparticle enhances the antibacterial efficacy of nisin, Free Radical Biology and Medicine, 101: 434-445, 2016, 6.17, Click Here (DOI)
  32. PK Borah, S Chakraborty, Anupam Nath Jha, S Rajkhowa, RK Duary*, In silico approaches and proportional odds model towards identifying selective ADAM17 inhibitors from anti-inflammatory natural molecules, Journal of Molecular Graphics and Modelling, 70: 129-139, 2016, 2.079, Click Here (DOI)
  33. Sanchaita Rajkhowa, Anupam Nath Jha and Ramesh Ch. Deka, Anti-tubercular drug development: computational strategies to identify potential compounds, Journal of Molecular Graphics and Modelling, 62: 56-68, 2015, 2.079, Click Here (DOI)
  34. Nabanita Saikia, Anupam Nath Jha and Ramesh Ch. Deka, Molecular dynamics study on graphene-mediated pyrazinamide drug delivery onto the pncA protein, RSC Advances, 4: 24944-24954, 2014, 3.070, Click Here (DOI)
  35. Nabanita Saikia, Anupam Nath Jha and Ramesh Ch. Deka, Dynamics of Fullerene-Mediated Heat-Driven Release of Drug Molecules from Carbon Nanotubes, The Journal of Physical Chemistry Letters, 4: 4126−4132, 2013, 6.71, Click Here (DOI)
  36. Nabanita Saikia, Anupam Nath Jha and Ramesh Ch. Deka, Interaction of pyrazinamide drug functionalized carbon and boron nitride nanotubes with pncA protein: A molecular dynamics and density functional approach, RSC Advances, 3: 15102-15107, 2013, 3.070, Click Here (DOI)
  37. Anupam Nath Jha, Vishveshwara S. and Banavar JR., Amino acid interaction preferences in helical membrane proteins, Protein Engineering Design and Selection, 24(8): 579-588, 2011, 1.774, Click Here (DOI)
  38. Anupam Nath Jha, Vishveshwara S. and Banavar JR., Amino acid interaction preferences in proteins, Protein Science, 19(3): 603-616, 2010, 3.876, Click Here (DOI)
  39. Anupam Nath Jha, Ananthasuresh GK, Vishveshwara S, A search for energy minimized sequences of proteins, PLoS One, 4(8): e66848, 2009, 2.740, Click Here (DOI)
  40. Anupam Nath Jha, Vishveshwara S., Inter-helical interactions in membrane proteins: analysis based on the local backbone geometry and the side chain interactions, Journal of Biomolecular Structure and Dynamic, 26(6): 719-729, 2009, 4.986, Click Here (DOI)
  41. Anupam Nath Jha, Ananthasuresh GK, Vishveshwara S., Protein sequence design based on the topology of the native state structure, Journal of Theoretical Biology, 248(1): 81-90, 2007, 2.327, Click Here (DOI)
  42. Luthra A, Anupam Nath Jha, Ananthasuresh GK, Vishveshwara S., A method for computing the inter-residue interaction potentials for reduced amino acid alphabet, Journal of Biosciences, 32(5): 883-889, 2007, 1.65, Click Here (DOI)