This page allows users to get access to all the transcriptomics level experiments conducted and data generated from rice plants in response to Rhizoctonia solani (R. solani) infection. Users can also download the differentially expressed genes (DEGs) by clicking on Download the genes. To know more about MIAPPE, visit https://www.miappe.org/
| Sl.No | Title of the study | Method | Data Availability | Publication | Download the Genes | MIAPPE_Checklist |
|---|---|---|---|---|---|---|
| Time-course transcriptome analysis identifies rewiring patterns of transcriptional regulatory networks in rice under Rhizoctonia solani infection | Time-Series RNA-Seq analysis on a widely cultivated rice variety BPT-5204 for identifying transcriptome level response signatures during R. solani infection at 1st, 2nd and 5th day post infection (dpi). In total, 428, 3225 and 1225 genes were differentially expressed in the treated rice plants on 1, 2 and 5 dpi, respectively. | PRJNA725619 | Das et al. (2022) |
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| Alterations in rice chloroplast integrity, photosynthesis and metabolome associated with pathogenesis of Rhizoctonia solani | RNA-Sequencing analysis to decipher susceptible rice cultivar PB1 (Pusa Basmati-1) response to R.solani pathogenesis | PRJNA298635 | Ghosh et al. (2017) |
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| Transcriptome analysis of rice leaves in response to Rhizoctonia solani infection and reveals a novel regulatory mechanism | RNA-Sequencing analysis was performed using Rhizoctonia solani inoculated Wild-type (WT) rice (Oryza sativa L. Japonica. cv. Dongjin and Longjing 11) leaves after 48 h of inoculation | Peng Yuan et al. (2020) |
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| Comparative Transcriptome Analyses of Gene ExpressionChanges Triggered by Rhizoctonia solani AG1 IA Infection in Resistantand Susceptible Rice Varieties | RNA-Sequencing analysis of two rice cultivators TeQing (a moderately resistant cultivar) and Lemont (a susceptible cultivar) leaves upon R.solani infection under 5 differentt time points. | PRJNA392837 | Zhang et al. (2017) |
Click here to download (L12)
Click here to download (L24) Click here to download (L36) Click here to download (L48) Click here to download (L72) Click here to download (T12) Click here to download (T24) Click here to download (T36) Click here to download (T48) Click here to download (T72) |
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| Comparison of leaf transcriptome in response to Rhizoctonia solani infection between resistant and susceptible rice cultivars | RNA-Seq analysis was conducted on two different varieties of rice moderate resistant cultivar (Yanhui-888, YH) and a susceptible cultivar (Jingang-30, JG) to detect response against R.solani infection. | PRJNA551731 | Shi et al. (2020) |
Click here to download (Y)
Click here to download (J) |
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| "Comparative Transcriptome Analysis of Rhizoctonia solani-resistant and -Susceptible Rice Cultivars Reveals the Importance of Pathogen Recognition and Active Immune Responses in Host Resistance " | Microarray analysis was conducted to check transcriptomic changes occurring in two different rice varieties susceptible Lemont and moderately resistant YSBR1 after R.solani infection. | Yuan et al. (2018) |
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